The Gut Mastery Course

Bloating, food reactions, altered bowel habits, reflux, fatigue, brain fog, skin symptoms. Patients arrive with a history of elimination diets, inconclusive testing, and a working self-diagnosis. This course gives you the differential framework, testing rationale, treatment sequencing, and referral criteria to work through that complexity with clinical confidence.

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Modules

Disordered Eating

Healthy Aging

Weight Management

Hormonal Health

Gut Health

Diet Decoder

Clinical Nutrition

9

Modules

9

Modules

6

Approximately

6

Approximately

6

Approximately

Updated for the current gut-health landscape

Gut and microbiome science move quickly. This course is built to reflect current clinical conversations around SIBO, IMO, SIFO, and ISO classification; breath-testing interpretation; responsible IgG food sensitivity testing; intestinal permeability and zonulin; IBS and the gut-brain axis; long-term FODMAP sustainability; Akkermansia and next-generation probiotics; strain-specific probiotic evidence; biofilm-targeted treatment; and post-infectious and post-viral gut presentations, including gut symptoms after COVID and other systemic illness.

The objective is not to track every new microbiome trend. It is to develop a decision process that adapts as the evidence changes.

From gut protocols to gut clinical reasoning

Many clinicians are taught gut care as a series of interventions. Remove this. Replace that. Add this probiotic. Repair the lining. Retest later. Those steps can be useful, but only when connected to a clear assessment first. This course focuses on the full clinical sequence.

Differentiate

Clarify whether the patient's symptoms point to allergy, sensitivity, intolerance, FODMAP reaction, IBS, intestinal permeability, SIBO, IMO, SIFO, ISO, inflammatory disease, medication effect, or a referral-level concern.

Test carefully

Using intestinal permeability concepts responsibly in patient education and clinical planning, including the current state of the evidence.

Interpret responsibly

Evaluate IgG, zonulin, breath testing, stool testing, and organic-acid testing without overclaiming certainty.

Treat sequentially

Match interventions to the likely driver, patient tolerance, evidence, scope, and safety considerations.

Reassess

Use symptom tracking, retesting decisions, follow-up cadence, and referral thresholds to guide next steps.

Modules

Module

01

The gut differential

Building a structured starting differential before recommending testing, elimination, or treatment.

Module

02

Leaky gut and zonulin

Using intestinal permeability concepts responsibly in patient education and clinical planning, including the current state of the evidence.

Module

03

IgG food sensitivity testing

Deciding when testing, elimination, or another approach is most appropriate — and understanding what IgG results can and cannot confirm.

Module

04

IBS and the gut-brain axis

Supporting patients through the transition from medication-supported weight loss into long-term maintenance.

Module

05

SIBO, IMO, SIFO, and ISO

Identifying underlying contributors — thyroid, cortisol, sleep, insulin — that affect weight, energy, appetite, adherence, and long-term outcomes.

Module

06

SIBO and IMO treatment protocols

When fasting is useful, when it should be modified, and when it should be avoided in weight-management patients.

Module

07

Probiotics in 2026

Structured pathways for the six clinical presentations: assessment, support plan, monitoring, and referral.

Module

08

Repair and rebuild

Helping patients understand what may be supportive, what is overstated, and what should not be positioned as a replacement for appropriate medical care.

Module

09

The integrative gut consult workflow

One integrated workflow for managing complex gut cases from initial presentation through follow-up and referral.

Module

01

The gut differential

Building a structured starting differential before recommending testing, elimination, or treatment.

Module

02

Leaky gut and zonulin

Using intestinal permeability concepts responsibly in patient education and clinical planning, including the current state of the evidence.

Module

03

IgG food sensitivity testing

Deciding when testing, elimination, or another approach is most appropriate — and understanding what IgG results can and cannot confirm.

Module

04

IBS and the gut-brain axis

Supporting patients through the transition from medication-supported weight loss into long-term maintenance.

Module

05

SIBO, IMO, SIFO, and ISO

Identifying underlying contributors — thyroid, cortisol, sleep, insulin — that affect weight, energy, appetite, adherence, and long-term outcomes.

Module

06

SIBO and IMO treatment protocols

When fasting is useful, when it should be modified, and when it should be avoided in weight-management patients.

Module

07

Probiotics in 2026

Structured pathways for the six clinical presentations: assessment, support plan, monitoring, and referral.

Module

08

Repair and rebuild

Helping patients understand what may be supportive, what is overstated, and what should not be positioned as a replacement for appropriate medical care.

Module

09

The integrative gut consult workflow

One integrated workflow for managing complex gut cases from initial presentation through follow-up and referral.

Module

01

The gut differential

Building a structured starting differential before recommending testing, elimination, or treatment.

Module

02

Leaky gut and zonulin

Using intestinal permeability concepts responsibly in patient education and clinical planning, including the current state of the evidence.

Module

03

IgG food sensitivity testing

Deciding when testing, elimination, or another approach is most appropriate — and understanding what IgG results can and cannot confirm.

Module

04

IBS and the gut-brain axis

Supporting patients through the transition from medication-supported weight loss into long-term maintenance.

Module

05

SIBO, IMO, SIFO, and ISO

Identifying underlying contributors — thyroid, cortisol, sleep, insulin — that affect weight, energy, appetite, adherence, and long-term outcomes.

Module

06

SIBO and IMO treatment protocols

When fasting is useful, when it should be modified, and when it should be avoided in weight-management patients.

Module

07

Probiotics in 2026

Structured pathways for the six clinical presentations: assessment, support plan, monitoring, and referral.

Module

08

Repair and rebuild

Helping patients understand what may be supportive, what is overstated, and what should not be positioned as a replacement for appropriate medical care.

Module

09

The integrative gut consult workflow

One integrated workflow for managing complex gut cases from initial presentation through follow-up and referral.

What you'll be able to do

Build a structured gut differential before reaching for testing, elimination, or treatment.

Discuss semaglutide and tirzepatide with enough professional literacy to educate, refer, and co-manage — within scope.

Use IgG food sensitivity testing and elimination diets more selectively and contextually.

Apply Rome IV-style thinking to IBS presentations and account for the gut-brain axis.

Differentiate SIBO, IMO, SIFO, and ISO, and interpret glucose and lactulose breath testing more carefully.

Compare pharmaceutical and botanical treatment options and sequence gut repair appropriately.

Choose probiotic strategies based on presentation, tolerance, and treatment stage — and recognise when probiotics may worsen symptoms.

What's included

  • Prescribing-clinician communication templates

  • GLP-1 co-management checklists

  • Referral guides

  • Protein and sarcopenia-risk tools

  • Micronutrient checklists

  • Six patient scenario workflows.

The full track, or a single course

The full track, or a single course

Individual courses answer focused questions. The full track teaches you how those questions connect. A patient on a GLP-1 medication may also carry sarcopenia risk, gut symptoms, micronutrient gaps, and a disordered-eating pattern at the same time. Treating each in isolation misses the case. The value of the full track is seeing the whole picture.

Single course

Focused training in one area

One course of your choice

Course-specific resources

Certificate of completion for that course

Full track

A complete clinical nutrition framework

All seven courses

One course of your choice

One integrated pathway

Course-specific resources

The full resource library

Certificate of completion for that course

Cross-course cases

Certificate of completion for that course

Live case reviews, where inc

Certificate of completion for that course

Full-track certificate of completion

Certificate of completion for that course

Preferential bundled pricing

Certificate of completion for that course

The integrative role

Gut care is strongest when practitioners can work across both conventional and naturopathic perspectives. A patient may need rifaximin, a botanical protocol, a prokinetic, a low-FODMAP trial, motility support, stress regulation, or referral for colonoscopy. The clinical skill is knowing which belongs first.

From weight-loss advice to clinical co-management

The course is built around six real-world patient presentations.

black and gray electronic devices

The GLP-1-curious patient

How to discuss expectations, referral, risks, benefits, nutritional preparation, and the role of lifestyle before medication begins.

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The patient already on GLP-1 therapy

How to support nutrition, hydration, gastrointestinal tolerance, protein intake, micronutrient status, and muscle preservation.

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The patient losing weight too quickly

How to identify risk patterns, screen for inadequate intake, and respond appropriately.

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The non-responder

How to think through adherence, metabolic contributors, sleep, stress, medications, and when to refer.

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The discontinuing patient

How to build maintenance supports before and after tapering or stopping medication.

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The patient seeking natural alternatives

How to separate evidence-informed metabolic support from exaggerated supplement claims.

Who this course is for

Practitioners who see patients with obesity, weight-management concerns, metabolic syndrome, type 2 diabetes, insulin resistance, PCOS, NAFLD, or musculoskeletal presentations related to weight. Clinicians who are regularly asked about semaglutide, tirzepatide, or natural alternatives. Relevant for naturopathic doctors, integrative medical doctors, dietitians, nutrition professionals, and allied health practitioners in primary-care-adjacent settings or those building a metabolic-health focus

FAQ

Does completion expand my scope of practice?

No. You remain responsible for working within the laws, standards, and scope of your jurisdiction.

Who can enrol?

NDs, MDs, residents, dietitians, and eligible allied health professionals working within their scope.

Are live sessions included?

CONFIRM: number, format, and availability of live case-review sessions.

How long does it take?

CONFIRM: study period, access window, and expected weekly commitment.

Do the courses have to be done in order?

They can be taken on their own, but full-track learners should follow the recommended sequence, since later courses build on the foundational framework.

Is this a diploma?

No. It is a structured professional-education track that awards a certificate of completion.

Can I take courses individually?

Yes. Each of the seven courses can be bought separately.

FAQ

Does completion expand my scope of practice?

No. You remain responsible for working within the laws, standards, and scope of your jurisdiction.

Who can enrol?

NDs, MDs, residents, dietitians, and eligible allied health professionals working within their scope.

Are live sessions included?

CONFIRM: number, format, and availability of live case-review sessions.

How long does it take?

CONFIRM: study period, access window, and expected weekly commitment.

Do the courses have to be done in order?

They can be taken on their own, but full-track learners should follow the recommended sequence, since later courses build on the foundational framework.

Is this a diploma?

No. It is a structured professional-education track that awards a certificate of completion.

Can I take courses individually?

Yes. Each of the seven courses can be bought separately.

FAQ

Does completion expand my scope of practice?

No. You remain responsible for working within the laws, standards, and scope of your jurisdiction.

Who can enrol?

NDs, MDs, residents, dietitians, and eligible allied health professionals working within their scope.

Are live sessions included?

CONFIRM: number, format, and availability of live case-review sessions.

How long does it take?

CONFIRM: study period, access window, and expected weekly commitment.

Do the courses have to be done in order?

They can be taken on their own, but full-track learners should follow the recommended sequence, since later courses build on the foundational framework.

Is this a diploma?

No. It is a structured professional-education track that awards a certificate of completion.

Can I take courses individually?

Yes. Each of the seven courses can be bought separately.

a blue circle with a black background

Nutritio

A 7-course applied training pathway for evidence-informed nutrition in clinical practice.

7

Modules

40+

hours

Clinical Resources

a blue circle with a black background

Nutritio

A 7-course applied training pathway for evidence-informed nutrition in clinical practice.

7

Modules

40+

hours

Clinical Resources

Evidence-Informed Clinical Nutrition

Translate nutrition evidence into individualized, defensible patient recommendations through a structured consultation framework.

7

Modules

6

Hours

Clinical Resources

Evidence-Informed Clinical Nutrition

Translate nutrition evidence into individualized, defensible patient recommendations through a structured consultation framework.

7

Modules

6

Hours

Clinical Resources

Tell us where you are in your clinical journey.

Personalized guidance on membership, courses, or mentorship

Clear next steps based on your stage of practice

A practical path into the OmniPraxis community

“The right support after graduation can change the trajectory of a clinician’s entire practice.”

Joseph Alexander - Official Framer Partner

Dr. Afsoun Khalili

Co-Founder

We’ll help you identify the most relevant next step, whether that is community membership, a course, mentorship, the Chiron Program, or a partnership conversation.

What would you like to explore?

Professional stage

We respond within 48 hours.

Tell us where you are in your clinical journey.

Personalized guidance on membership, courses, or mentorship

Clear next steps based on your stage of practice

A practical path into the OmniPraxis community

“The right support after graduation can change the trajectory of a clinician’s entire practice.”

Joseph Alexander - Official Framer Partner

Dr. Afsoun Khalili

Co-Founder

We’ll help you identify the most relevant next step, whether that is community membership, a course, mentorship, the Chiron Program, or a partnership conversation.

What would you like to explore?

Professional stage

We respond within 48 hours.

Tell us where you are in your clinical journey.

Personalized guidance on membership, courses, or mentorship

Clear next steps based on your stage of practice

A practical path into the OmniPraxis community

“The right support after graduation can change the trajectory of a clinician’s entire practice.”

Joseph Alexander - Official Framer Partner

Dr. Afsoun Khalili

Co-Founder

We’ll help you identify the most relevant next step, whether that is community membership, a course, mentorship, the Chiron Program, or a partnership conversation.

What would you like to explore?

Professional stage

We respond within 48 hours.